XTMS: pathway design in an eXTended metabolic space
نویسندگان
چکیده
منابع مشابه
XTMS: pathway design in an eXTended metabolic space
As metabolic engineering and synthetic biology progress toward reaching the goal of a more sustainable use of biological resources, the need of increasing the number of value-added chemicals that can be produced in industrial organisms becomes more imperative. Exploring, however, the vast possibility of pathways amenable to engineering through heterologous genes expression in a chassis organism...
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Despite the increase in recent years in the portfolio of addedvalue chemicals that can be microbially produced, the design process still remains a complex system, costly and rather slow. To overcome such limitations, the development of Computer-Aided-Design (CAD) tools is necessary to design production pathway that systematically screen metabolic databases to select best genes to import into ch...
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15 صفحه اولThe metabolic pathway collection: an update
The Metabolic Pathway Collection from EMP is an extraction of data from the larger Enzymes and Metabolic Pathways database (EMP). This extraction has been made publicly available in the hope that others will find it useful for a variety of purposes. The original release in October 1995 contained 1814 distinct pathways. The current collection contains 2180. Metabolic reconstructions for the firs...
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ژورنال
عنوان ژورنال: Nucleic Acids Research
سال: 2014
ISSN: 1362-4962,0305-1048
DOI: 10.1093/nar/gku362